Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | BE963_RS12320 | Not Available | Negative | 1883708 - 1885651 | 70820.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | BE963_RS12325 | Not Available | Positive | 1885841 - 1886581 | 27191.4 |
| hypothetical protein | BE963_RS12335 | Not Available | Positive | 1886793 - 1887704 | 34919.5 |
| ytfj family protein | BE963_RS12340 | Not Available | Negative | 1887794 - 1888348 | 20406.7 |
| duf1107 domain-containing protein | BE963_RS12345 | Not Available | Positive | 1888673 - 1888879 | 8072.24 |
| hemolysin family protein | BE963_RS12350 | Not Available | Negative | 1888941 - 1890284 | 49783.6 |
| peptide-methionine (s)-s-oxide reductase msra | BE963_RS12355 | Not Available | Negative | 1890607 - 1891245 | 23335.3 |
| autotransporter assembly complex protein tama | BE963_RS12365 | Not Available | Positive | 1891451 - 1893184 | 64799.7 |
| autotransporter assembly complex protein tamb | BE963_RS12370 | Not Available | Positive | 1893181 - 1896960 | 136839.0 |
| gamma-glutamylcyclotransferase | BE963_RS12375 | Not Available | Positive | 1896963 - 1897304 | 12867.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





