Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase ulaf | BE963_RS12215 | Not Available | Positive | 1868229 - 1868915 | 25355.2 |
| duf1471 family protein yjfy | BE963_RS12220 | Not Available | Negative | 1869045 - 1869320 | 10155.0 |
| 30s ribosomal protein s6 | BE963_RS12225 | Not Available | Positive | 1869647 - 1870042 | 15217.9 |
| primosomal replication protein n | BE963_RS12230 | Not Available | Positive | 1870049 - 1870363 | 11472.9 |
| 30s ribosomal protein s18 | BE963_RS12235 | Not Available | Positive | 1870368 - 1870595 | 8986.94 |
| 50s ribosomal protein l9 | BE963_RS12240 | Not Available | Positive | 1870637 - 1871086 | 15770.0 |
| duf2686 family protein | BE963_RS12245 | Not Available | Negative | 1871157 - 1871951 | 29660.9 |
| hypothetical protein | BE963_RS29150 | Not Available | Positive | 1872226 - 1872519 | 11413.8 |
| hypothetical protein | BE963_RS12255 | Not Available | Negative | 1872583 - 1873008 | 16515.9 |
| rna-guided endonuclease insq/tnpb family protein | BE963_RS12260 | Not Available | Positive | 1873016 - 1874212 | 45409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





