Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter periplasmic adaptor subunit mdtn | BE963_RS11600 | Not Available | Negative | 1749036 - 1750067 | 36896.3 |
| ytca family lipoprotein | BE963_RS11605 | Not Available | Negative | 1750086 - 1750361 | 10228.1 |
| alkyl sulfatase yjcs | BE963_RS11610 | Not Available | Negative | 1750570 - 1752555 | 73174.9 |
| allose kinase | BE963_RS11615 | Not Available | Negative | 1752828 - 1753757 | 33727.8 |
| d-allulose-6-phosphate 3-epimerase | BE963_RS11620 | Not Available | Negative | 1753741 - 1754436 | 26080.6 |
| d-allose abc transporter permease | BE963_RS11625 | Not Available | Negative | 1754447 - 1755427 | 34317.8 |
| d-allose abc transporter atp-binding protein alsa | BE963_RS11630 | Not Available | Negative | 1755406 - 1756938 | 56807.4 |
| d-allose transporter substrate-binding protein | BE963_RS11635 | Not Available | Negative | 1757065 - 1758000 | 32897.7 |
| murr/rpir family transcriptional regulator | BE963_RS11640 | Not Available | Negative | 1758059 - 1758949 | 32364.1 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | BE963_RS11650 | Not Available | Positive | 1759308 - 1759757 | 16074.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





