Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide response transcriptional regulator soxs | BE963_RS11470 | Not Available | Negative | 1723084 - 1723407 | 12911.6 |
| redox-sensitive transcriptional activator soxr | BE963_RS11475 | Not Available | Positive | 1723493 - 1723957 | 17235.8 |
| guanine/hypoxanthine transporter ghxp | BE963_RS11495 | Not Available | Positive | 1724503 - 1725852 | 45714.4 |
| na+/h+ antiporter | BE963_RS11500 | Not Available | Positive | 1726003 - 1727652 | 60527.5 |
| t3ss effector pentapeptide repeat protein espx5 | BE963_RS11505 | Not Available | Negative | 1727806 - 1729098 | 49432.1 |
| cation/acetate symporter actp | BE963_RS11510 | Not Available | Negative | 1729276 - 1730925 | 59213.7 |
| duf485 domain-containing protein | BE963_RS11515 | Not Available | Negative | 1730922 - 1731236 | 11672.3 |
| acetate--coa ligase | BE963_RS11520 | Not Available | Negative | 1731709 - 1733667 | 72083.4 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | BE963_RS11535 | Not Available | Positive | 1734059 - 1735495 | 53735.7 |
| cytochrome c nitrite reductase pentaheme subunit | BE963_RS11540 | Not Available | Positive | 1735540 - 1736106 | 20657.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





