Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | BE963_RS11410 | Not Available | Positive | 1711786 - 1712865 | 39155.2 |
| aromatic amino acid transaminase | BE963_RS11415 | Not Available | Positive | 1713118 - 1714311 | 43532.1 |
| hypothetical protein | BE963_RS29760 | Not Available | Negative | 1714814 - 1715036 | 8603.22 |
| acid phosphatase apha | BE963_RS11425 | Not Available | Positive | 1715437 - 1716150 | 26104.9 |
| secondary thiamine-phosphate synthase enzyme yjbq | BE963_RS11430 | Not Available | Positive | 1716261 - 1716677 | 15656.8 |
| mmcq/yjbr family dna-binding protein | BE963_RS11435 | Not Available | Positive | 1716681 - 1717037 | 13520.2 |
| excinuclease abc subunit uvra | BE963_RS11440 | Not Available | Negative | 1717072 - 1719894 | 103874.0 |
| single-stranded dna-binding protein ssb1 | BE963_RS11450 | Not Available | Positive | 1720149 - 1720685 | 18976.1 |
| yjcb family protein | BE963_RS11455 | Not Available | Negative | 1720784 - 1721065 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | BE963_RS11465 | Not Available | Positive | 1721495 - 1723081 | 60563.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





