Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lygf | BE963_RS21260 | Not Available | Positive | 3632728 - 3633150 | 16189.5 |
| Antiterminator protein q | BE963_RS21265 | Not Available | Positive | 3633311 - 3633829 | 19613.8 |
| hypothetical protein | BE963_RS21270 | Not Available | Negative | 3633860 - 3635293 | 54851.1 |
| nucleoid-associated protein | BE963_RS21275 | Not Available | Negative | 3635265 - 3636323 | 40246.2 |
| Host killer protein | BE963_RS21280 | Not Available | Positive | 3636653 - 3636808 | 5753.29 |
| Hypothetical protein | BE963_RS21285 | Not Available | Positive | 3637272 - 3637871 | 23028.4 |
| Hypothetical protein | BE963_RS21290 | Not Available | Positive | 3637871 - 3638161 | 10804.1 |
| duf1133 family protein | BE963_RS21295 | Not Available | Positive | 3638158 - 3638700 | 20538.1 |
| Trna-thr; | Not Available | Not Available | Positive | 3639054 - 3639129 | Not Available |
| Trna-gly; | Not Available | Not Available | Positive | 3639133 - 3639207 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





