Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1481 domain-containing protein | BE963_RS11085 | Not Available | Positive | 1641960 - 1642655 | 26352.9 |
| zinc resistance sensor/chaperone zrap | BE963_RS11090 | Not Available | Negative | 1642657 - 1643082 | 15230.3 |
| hypothetical protein | BE963_RS29935 | Not Available | Negative | 1643085 - 1643213 | 5010.84 |
| two-component system sensor histidine kinase zras | BE963_RS11100 | Not Available | Positive | 1643320 - 1644717 | 51151.1 |
| sigma-54-dependent response regulator transcription factor zrar | BE963_RS11105 | Not Available | Positive | 1644714 - 1646039 | 48276.3 |
| phosphoribosylamine--glycine ligase | BE963_RS11110 | Not Available | Negative | 1646036 - 1647325 | 45989.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BE963_RS11115 | Not Available | Negative | 1647337 - 1648926 | 57357.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1649543 - 1651084 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1651170 - 1651245 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1651439 - 1654343 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





