Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator oxyr | BE963_RS10865 | Not Available | Positive | 1600257 - 1601174 | 34287.0 |
| si-specific nad(p)(+) transhydrogenase | BE963_RS10870 | Not Available | Negative | 1601157 - 1602557 | 51536.4 |
| hth-type transcriptional repressor fabr | BE963_RS10880 | Not Available | Positive | 1602889 - 1603539 | 24536.5 |
| yijd family membrane protein | BE963_RS10885 | Not Available | Positive | 1603539 - 1603898 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | BE963_RS10890 | Not Available | Negative | 1603938 - 1605038 | 41939.3 |
| tonb-dependent vitamin b12 receptor btub | BE963_RS10895 | Not Available | Positive | 1605407 - 1607251 | 68424.7 |
| glutamate racemase | BE963_RS10900 | Not Available | Positive | 1607196 - 1608053 | 31132.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1608425 - 1609966 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1610052 - 1610127 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1610321 - 1613225 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





