Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | BE963_RS10550 | Not Available | Negative | 1532799 - 1533113 | 12263.5 |
| rhamnulose-1-phosphate aldolase | BE963_RS10555 | Not Available | Negative | 1533123 - 1533947 | 30156.2 |
| l-rhamnose isomerase | BE963_RS10560 | Not Available | Negative | 1534030 - 1535289 | 47172.0 |
| rhamnulokinase | BE963_RS10565 | Not Available | Negative | 1535286 - 1536755 | 54003.9 |
| hth-type transcriptional activator rhas | BE963_RS10570 | Not Available | Positive | 1537043 - 1537879 | 32404.2 |
| hth-type transcriptional activator rhar | BE963_RS10575 | Not Available | Positive | 1537953 - 1538801 | 32461.5 |
| l-rhamnose/proton symporter rhat | BE963_RS10580 | Not Available | Negative | 1538798 - 1539832 | 37338.1 |
| superoxide dismutase | BE963_RS10585 | Not Available | Positive | 1540117 - 1540737 | 23080.2 |
| 2-keto-3-deoxygluconate transporter | BE963_RS10595 | Not Available | Positive | 1540997 - 1541980 | 33771.5 |
| 6-hydroxyaminopurine reductase | BE963_RS10600 | Not Available | Positive | 1542129 - 1542803 | 25325.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





