Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BE963_RS29750 | Not Available | Positive | 1520740 - 1521627 | 33541.3 |
| transposase | BE963_RS29755 | Not Available | Positive | 1521640 - 1522554 | 33659.9 |
| copg family transcriptional regulator | BE963_RS10505 | Not Available | Positive | 1523249 - 1523467 | 8408.23 |
| formate dehydrogenase accessory protein fdhe | BE963_RS10510 | Not Available | Negative | 1523682 - 1524611 | 34690.5 |
| formate dehydrogenase cytochrome b556 subunit | BE963_RS10515 | Not Available | Negative | 1524608 - 1525243 | 24607.7 |
| formate dehydrogenase o subunit beta | BE963_RS10520 | Not Available | Negative | 1525240 - 1526142 | 33102.1 |
| formate dehydrogenase-n subunit alpha | BE963_RS10525 | Not Available | Negative | 1526155 - 1529205 | 112474.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | BE963_RS10535 | Not Available | Positive | 1529399 - 1530232 | 30533.8 |
| hypothetical protein | BE963_RS10540 | Not Available | Positive | 1530321 - 1530986 | 25084.9 |
| carbohydrate porin | BE963_RS10545 | Not Available | Positive | 1531364 - 1532758 | 51946.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





