Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydga family protein | BE963_RS10335 | Not Available | Positive | 1485466 - 1486896 | 52561.8 |
| acyltransferase | BE963_RS10340 | Not Available | Negative | 1486937 - 1487869 | 36309.1 |
| dna polymerase i | BE963_RS10350 | Not Available | Positive | 1488233 - 1491019 | 103137.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | BE963_RS10355 | Not Available | Negative | 1491401 - 1492033 | 23562.2 |
| hypothetical protein | BE963_RS29745 | Not Available | Positive | 1492330 - 1492496 | 6289.25 |
| der gtpase-activating protein yihi | BE963_RS10360 | Not Available | Positive | 1492615 - 1493124 | 19060.3 |
| oxygen-independent coproporphyrinogen iii oxidase | BE963_RS10365 | Not Available | Positive | 1493313 - 1494686 | 52742.0 |
| yshb family small membrane protein | BE963_RS10370 | Not Available | Negative | 1494876 - 1494986 | 3618.45 |
| nitrogen regulation protein nr(i) | BE963_RS10375 | Not Available | Negative | 1495098 - 1496507 | 52296.9 |
| nitrogen regulation protein nr(ii) | BE963_RS10380 | Not Available | Negative | 1496519 - 1497568 | 38558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





