Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' ssdna/rna exonuclease tatd | BE963_RS10235 | Not Available | Positive | 1465183 - 1465965 | 29047.6 |
| transcription/translation regulatory transformer protein rfah | BE963_RS10240 | Not Available | Negative | 1465962 - 1466450 | 18359.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | BE963_RS10245 | Not Available | Positive | 1466617 - 1468110 | 55655.9 |
| nad(p)h-flavin reductase | BE963_RS10250 | Not Available | Positive | 1468156 - 1468857 | 26226.4 |
| acetyl-coa c-acyltransferase fada | BE963_RS10255 | Not Available | Negative | 1469048 - 1470211 | 40848.7 |
| fatty acid oxidation complex subunit alpha fadb | BE963_RS10260 | Not Available | Negative | 1470221 - 1472410 | 79570.4 |
| xaa-pro dipeptidase | BE963_RS10265 | Not Available | Positive | 1472600 - 1473931 | 50178.9 |
| impact family protein | BE963_RS10270 | Not Available | Positive | 1473931 - 1474545 | 21708.1 |
| trk system potassium transporter trkh | BE963_RS10275 | Not Available | Positive | 1474584 - 1476035 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | BE963_RS10280 | Not Available | Positive | 1476047 - 1476592 | 21230.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





