Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 domain-containing protein | BE963_RS10085 | Not Available | Positive | 1436330 - 1437037 | 26730.4 |
| tyrosine recombinase xerc | BE963_RS10090 | Not Available | Positive | 1437034 - 1437930 | 33897.8 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | BE963_RS10095 | Not Available | Positive | 1437930 - 1438646 | 27123.4 |
| dna helicase ii | BE963_RS10100 | Not Available | Positive | 1438730 - 1440892 | 82048.8 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | BE963_RS10105 | Not Available | Negative | 1440937 - 1441839 | 32683.9 |
| phosphodiester glycosidase family protein | BE963_RS10110 | Not Available | Negative | 1441922 - 1442686 | 28012.2 |
| protein ysgd | BE963_RS29535 | Not Available | Positive | 1442848 - 1442904 | 2140.55 |
| magnesium/cobalt transporter cora | BE963_RS10115 | Not Available | Positive | 1443056 - 1444006 | 36591.8 |
| duf2628 domain-containing protein | BE963_RS10120 | Not Available | Negative | 1444049 - 1444429 | 14580.0 |
| protein yigg | BE963_RS10125 | Not Available | Negative | 1444443 - 1444823 | 14415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





