Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactonate utilization transcriptional regulator dgor | BE963_RS09450 | Not Available | Negative | 1304048 - 1304737 | 26081.1 |
| hypothetical protein | BE963_RS09455 | Not Available | Positive | 1305013 - 1305669 | 24107.8 |
| sugar-phosphatase | BE963_RS09460 | Not Available | Negative | 1305713 - 1306525 | 29722.8 |
| yidb family protein | BE963_RS09465 | Not Available | Negative | 1306640 - 1307038 | 13787.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | BE963_RS09470 | Not Available | Negative | 1307278 - 1309692 | 89967.1 |
| dna replication/repair protein recf | BE963_RS09475 | Not Available | Negative | 1309721 - 1310794 | 40516.4 |
| dna polymerase iii subunit beta | BE963_RS09480 | Not Available | Negative | 1310794 - 1311894 | 40589.1 |
| chromosomal replication initiator protein dnaa | BE963_RS09485 | Not Available | Negative | 1311899 - 1313302 | 52553.7 |
| hypothetical protein | BE963_RS29145 | Not Available | Positive | 1313599 - 1313679 | 3130.75 |
| 50s ribosomal protein l34 | BE963_RS09495 | Not Available | Positive | 1313909 - 1314049 | 5380.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





