Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BE963_RS09190 | Not Available | Positive | 1242858 - 1242986 | 4999.27 |
| sugar efflux transporter | BE963_RS09195 | Not Available | Positive | 1243416 - 1244600 | 43466.0 |
| carboxylate/amino acid/amine transporter | BE963_RS09200 | Not Available | Positive | 1244711 - 1245634 | 33107.4 |
| lipoprotein nlpa | BE963_RS09205 | Not Available | Negative | 1245638 - 1246456 | 29408.2 |
| protein yics | BE963_RS09210 | Not Available | Positive | 1246665 - 1246958 | 11049.3 |
| sycd/lcrh family type iii secretion system chaperone | BE963_RS09215 | Not Available | Positive | 1247260 - 1247757 | 19058.6 |
| hypothetical protein | BE963_RS09220 | Not Available | Positive | 1247767 - 1247949 | 6998.28 |
| yopb/ssec family type iii secretion system translocon subunit | BE963_RS09225 | Not Available | Positive | 1248005 - 1249786 | 64686.0 |
| hypothetical protein | BE963_RS09230 | Not Available | Positive | 1249799 - 1250929 | 41680.8 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | BE963_RS09235 | Not Available | Positive | 1250973 - 1252322 | 50060.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





