Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | BE963_RS09085 | Not Available | Positive | 1219185 - 1220405 | 43466.7 |
| dutp diphosphatase | BE963_RS09090 | Not Available | Positive | 1220383 - 1220841 | 16288.7 |
| nucleoid occlusion factor slma | BE963_RS09095 | Not Available | Positive | 1220948 - 1221544 | 22837.7 |
| orotate phosphoribosyltransferase | BE963_RS09100 | Not Available | Negative | 1221581 - 1222222 | 23568.3 |
| ribonuclease ph | BE963_RS09105 | Not Available | Negative | 1222288 - 1223004 | 25313.4 |
| yicc/yloc family endoribonuclease | BE963_RS09115 | Not Available | Positive | 1223131 - 1223994 | 33160.9 |
| dna damage-inducible protein d | BE963_RS09120 | Not Available | Positive | 1224216 - 1225040 | 31036.0 |
| trimeric intracellular cation channel family protein | BE963_RS09125 | Not Available | Positive | 1225331 - 1225948 | 22049.8 |
| nad-dependent dna ligase ligb | BE963_RS09130 | Not Available | Negative | 1225945 - 1227627 | 63285.2 |
| guanylate kinase | BE963_RS09135 | Not Available | Positive | 1227885 - 1228508 | 23608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





