Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | BE963_RS08770 | Not Available | Positive | 1153985 - 1154452 | 17577.1 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | BE963_RS08775 | Not Available | Positive | 1154570 - 1155043 | 17526.9 |
| 2,3-diketo-l-gulonate trap transporter large permease yian | BE963_RS08780 | Not Available | Positive | 1155046 - 1156323 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter substrate-binding protein yiao | BE963_RS08785 | Not Available | Positive | 1156336 - 1157322 | 36017.1 |
| l-xylulokinase | BE963_RS08790 | Not Available | Positive | 1157326 - 1158822 | 55163.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | BE963_RS08795 | Not Available | Positive | 1158819 - 1159481 | 23490.1 |
| l-ribulose-5-phosphate 3-epimerase | BE963_RS08800 | Not Available | Positive | 1159474 - 1160334 | 32560.0 |
| l-ribulose-5-phosphate 4-epimerase | BE963_RS08805 | Not Available | Positive | 1160328 - 1161023 | 25596.4 |
| arac family transcriptional regulator | BE963_RS08810 | Not Available | Negative | 1161055 - 1161870 | 31494.0 |
| mfs transporter | BE963_RS08815 | Not Available | Positive | 1162096 - 1163496 | 51488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





