Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage sensitivity protein dcrb | BE963_RS08050 | Not Available | Positive | 1009655 - 1010212 | 19788.7 |
| mfs transporter | BE963_RS08055 | Not Available | Negative | 1010216 - 1011433 | 42184.3 |
| ai-2e family transporter | BE963_RS08060 | Not Available | Positive | 1011565 - 1012614 | 38444.7 |
| 4'-phosphopantetheinyl transferase acpt | BE963_RS08065 | Not Available | Positive | 1012669 - 1013256 | 21710.8 |
| nickel abc transporter substrate-binding protein | BE963_RS08070 | Not Available | Positive | 1013367 - 1014941 | 58777.2 |
| nickel abc transporter permease subunit nikb | BE963_RS08075 | Not Available | Positive | 1014941 - 1015885 | 35250.3 |
| nickel abc transporter permease subunit nikc | BE963_RS08080 | Not Available | Positive | 1015882 - 1016715 | 30363.8 |
| nickel import atp-binding protein nikd | BE963_RS08085 | Not Available | Positive | 1016715 - 1017479 | 26814.1 |
| nickel import atp-binding protein nike | BE963_RS08090 | Not Available | Positive | 1017476 - 1018282 | 29742.5 |
| nickel-responsive transcriptional regulator nikr | BE963_RS08095 | Not Available | Positive | 1018288 - 1018689 | 15094.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





