Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | BE963_RS07935 | Not Available | Negative | 990518 - 991231 | 26297.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BE963_RS07940 | Not Available | Negative | 991233 - 992000 | 28428.7 |
| branched chain amino acid abc transporter permease livm | BE963_RS07945 | Not Available | Negative | 991997 - 993274 | 46287.2 |
| high-affinity branched-chain amino acid abc transporter permease livh | BE963_RS07950 | Not Available | Negative | 993271 - 994197 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | BE963_RS07955 | Not Available | Negative | 994245 - 995354 | 39394.9 |
| aspartate 1-decarboxylase autocleavage activator panm | BE963_RS07965 | Not Available | Positive | 995778 - 996161 | 14502.4 |
| is3-like element is1397 family transposase | BE963_RS28565 | Not Available | Positive | 996341 - 997689 | 51809.5 |
| branched chain amino acid abc transporter substrate-binding protein livj | BE963_RS07980 | Not Available | Negative | 997797 - 998900 | 39096.6 |
| rna polymerase sigma factor rpoh | BE963_RS07990 | Not Available | Negative | 999172 - 1000026 | 32470.6 |
| permease-like cell division protein ftsx | BE963_RS07995 | Not Available | Negative | 1000271 - 1001329 | 38578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





