Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | BE963_RS07830 | Not Available | Negative | 969810 - 971996 | 84359.5 |
| aspartate-semialdehyde dehydrogenase | BE963_RS07835 | Not Available | Negative | 972269 - 973372 | 40050.3 |
| naat family transporter yhgn | BE963_RS07840 | Not Available | Positive | 973564 - 974157 | 21491.9 |
| gluconate transporter | BE963_RS07845 | Not Available | Negative | 974214 - 975554 | 46418.9 |
| gluconokinase | BE963_RS07850 | Not Available | Negative | 975558 - 976085 | 19544.4 |
| gluconate operon transcriptional repressor gntr | BE963_RS07855 | Not Available | Negative | 976224 - 977219 | 36424.3 |
| quercetin 2,3-dioxygenase | BE963_RS07860 | Not Available | Negative | 977443 - 978138 | 26310.9 |
| oxidoreductase | BE963_RS07865 | Not Available | Negative | 978261 - 979298 | 38772.1 |
| n-acetyltransferase | BE963_RS07875 | Not Available | Positive | 979633 - 980121 | 18778.6 |
| hcp1 family type vi secretion system effector | BE963_RS07880 | Not Available | Positive | 980357 - 981535 | 44306.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





