Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | BE963_RS07565 | Not Available | Negative | 908271 - 909359 | 38856.3 |
| shikimate kinase arok | BE963_RS07570 | Not Available | Negative | 909416 - 909937 | 19539.2 |
| dna uptake porin hofq | BE963_RS07575 | Not Available | Negative | 910338 - 911576 | 44732.9 |
| dna utilization protein hofp | BE963_RS07580 | Not Available | Negative | 911488 - 911892 | 15080.0 |
| dna utilization protein hofo | BE963_RS07585 | Not Available | Negative | 911882 - 912322 | 16859.2 |
| dna utilization protein hofn | BE963_RS07590 | Not Available | Negative | 912306 - 912845 | 20840.2 |
| dna utilization protein hofm | BE963_RS07595 | Not Available | Negative | 912845 - 913624 | 29104.0 |
| peptidoglycan glycosyltransferase/peptidoglycan dd-transpeptidase mrca | BE963_RS07600 | Not Available | Positive | 913744 - 916296 | 93612.4 |
| adp compounds hydrolase nude | BE963_RS07605 | Not Available | Negative | 916464 - 917024 | 21138.4 |
| intracellular growth attenuator protein igaa | BE963_RS07610 | Not Available | Positive | 917344 - 919395 | 76373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





