Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccs/yhfk family putative transporter | BE963_RS07410 | Not Available | Positive | 877843 - 879933 | 79463.6 |
| bifunctional acetylornithine/succinyldiaminopimelate transaminase | BE963_RS07415 | Not Available | Negative | 880000 - 881220 | 43783.5 |
| aminodeoxychorismate synthase component 2 | BE963_RS07420 | Not Available | Negative | 881306 - 881869 | 20760.1 |
| putative adenosine monophosphate-protein transferase fic | BE963_RS07425 | Not Available | Negative | 881901 - 882503 | 23047.5 |
| yhfg family protein | BE963_RS07430 | Not Available | Negative | 882493 - 882660 | 6668.12 |
| peptidylprolyl isomerase a | BE963_RS07435 | Not Available | Negative | 882765 - 883337 | 20432.5 |
| mfs transporter tsga | BE963_RS07440 | Not Available | Positive | 883608 - 884789 | 43197.0 |
| nadph-nitrite reductase large subunit | BE963_RS07445 | Not Available | Positive | 885051 - 887594 | 93112.6 |
| nitrite reductase small subunit nird | BE963_RS07450 | Not Available | Positive | 887591 - 887917 | 12284.7 |
| nitrite transporter nirc | BE963_RS07455 | Not Available | Positive | 888043 - 888849 | 28592.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





