Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator aaer | BE963_RS06860 | Not Available | Positive | 796095 - 797024 | 34518.1 |
| metalloprotease tldd | BE963_RS06865 | Not Available | Negative | 797152 - 798597 | 51380.2 |
| asma2 domain-containing protein yhdp | BE963_RS06870 | Not Available | Negative | 798753 - 802553 | 138896.0 |
| ribonuclease g | BE963_RS06875 | Not Available | Negative | 802621 - 804090 | 55367.4 |
| nucleoside triphosphate pyrophosphatase yhde | BE963_RS06880 | Not Available | Negative | 804080 - 804673 | 21469.6 |
| rod shape-determining protein mred | BE963_RS06885 | Not Available | Negative | 804682 - 805170 | 18788.9 |
| rod shape-determining protein mrec | BE963_RS06890 | Not Available | Negative | 805170 - 806282 | 39772.1 |
| rod shape-determining protein mreb | BE963_RS06895 | Not Available | Negative | 806348 - 807391 | 36954.7 |
| rnase e specificity factor csrd | BE963_RS06910 | Not Available | Negative | 807696 - 809636 | 73433.8 |
| mdr family oxidoreductase | BE963_RS06915 | Not Available | Positive | 809788 - 810762 | 34693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





