Escherichia coli strain Ecol_316

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain Ecol_316 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. Ecol_316 exhibits optimal growth at 37.0°C, a temperature consistent with the physiological conditions of many host organisms, suggesting its ecological adaptation to host-associated habitats. As a member of the Enterobacteriaceae family, Ecol_316 likely plays a role in the complex microbial communities found within the gastrointestinal tracts of various hosts. The ability to grow in pairs or as single cells may facilitate its interactions within these communities, allowing for cooperation or competition with other microbial species. The facultative anaerobic metabolism of Ecol_316 enables it to adapt to fluctuating oxygen levels within the host environment, potentially influencing its survival and proliferation under different physiological conditions. Further exploration of the ecological roles of E. coli strain Ecol_316 in host-associated habitats could provide insights into its contributions to microbial diversity and function within the gut microbiome, as well as its potential interactions with host physiology. Understanding these dynamics could inform broader studies on microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain Ecol_316

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain Ecol_316
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain Ecol_316


Gene Summary

Adenine Count

1247934 bp

Thymine Count

1247604 bp

Guanine Count

1276239 bp

Cytosine Count

1284295 bp

Genome Length

5056072 bp

Protein-coding Genes

4484 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinBE963_RS29365Not Available+1 - 48318034.4
AttlNot AvailableNot Available+488 - 500Not Available
Ogr/delta-like zinc finger family proteinBE963_RS02690Not Available-510 - 7287888.48
Tail proteinBE963_RS02695Not Available-797 - 189740894.6
Tail proteinBE963_RS02700Not Available-1894 - 237918076.9
Tail tape measure proteinBE963_RS02705Not Available-2376 - 5453108941.0
Gpe familygtail proteinBE963_RS02710Not Available-5446 - 55654484.35
Phage tail assembly proteinBE963_RS02715Not Available-5580 - 588210896.5
Major tail tube proteinBE963_RS02720Not Available-5937 - 645218846.4
Major tail sheath proteinBE963_RS02725Not Available-6462 - 763442344.3

Displaying genes 1 – 10 of 5086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites