Bacteroides fragilis strain Q1F2

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain Q1F2 is a Gram-negative, rod-shaped, anaerobic bacterium that thrives in host-associated environments. It is a chemoorganotroph, indicating that it derives energy from organic compounds, and it exists as single cells rather than in clusters or chains. This strain has three replicons and possesses two membranes, characteristic of its Gram-negative classification. With an optimal growth temperature of 37°C, Bacteroides fragilis strain Q1F2 is classified as mesophilic, showing preference for moderate temperature ranges. Although it is non-motile, the presence of flagella may play a role in its interactions within the host environment. Bacteroides fragilis strain Q1F2 is free-living and has been identified in various hosts, including Homo sapiens (humans), Gallus gallus (chickens), various Metazoa (multicellular organisms), Equidae (horses), and Serpentes (snakes). Its pathogenic potential in humans is significant; it is associated with conditions such as bacteremia, abscesses, colitis, and colorectal cancer, among others. The strain's relationship with its hosts emphasizes its dual role as a commensal organism and a pathogen. While it contributes to the normal gut microbiota, it can also lead to serious health complications, particularly when it breaches host barriers. This duality highlights the complexity of microbial interactions within host ecosystems and the potential consequences of dysbiosis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strainstrain Q1F2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain Q1F2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain Q1F2 plasmid Q1F2-p1, complete

Gene Summary

Adenine Count

13723 bp

Thymine Count

12938 bp

Guanine Count

8990 bp

Cytosine Count

9699 bp

Genome Length

45350 bp

Protein-coding Genes

29 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotidyltransferase family proteinBUN20_RS13980Not AvailablePositive3178847 - 317992941854.7
abc transporter atp-binding proteinBUN20_RS13985Not AvailablePositive3179926 - 318156359945.4
hypothetical proteinBUN20_RS23555Not AvailablePositive3181605 - 31817455452.38
ides/mac family cysteine endopeptidaseBUN20_RS13995Not AvailablePositive3181768 - 318332456277.9
hypothetical proteinBUN20_RS14000Not AvailablePositive3183721 - 318521153127.8
tetratricopeptide repeat proteinBUN20_RS14005Not AvailableNegative3186257 - 3188986106902.0
duf3575 domain-containing proteinBUN20_RS14010Not AvailableNegative3189016 - 318957321536.0
hypothetical proteinBUN20_RS14015Not AvailableNegative3189600 - 318992912658.8
duf1566 domain-containing proteinBUN20_RS14020Not AvailableNegative3189948 - 319060424391.1
duf4906 domain-containing proteinBUN20_RS14025Not AvailableNegative3190633 - 319241464228.7

Displaying genes 2701 – 2710 of 4436 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Ad pathologiesCausesPMC10482867
DiarrheaCausesPMC13367044
ColitisCausesPMC13367044
Tumor formationCausesPMC13367044
Anaerobic bacteremiaCausesPMC5704556
Intraabdominal abscessesCausesPMC5704556
Colorectal cancerCausesPMC11704243
CrcCausesPMC11704243
BacteremiaCausesPMC8554563
SepticemiaCausesPMC8554563

Displaying health effects 1 – 10 of 19 in total