Beggiatoa leptomitoformis strain D-401

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Beggiatoa

Description

Beggiatoa leptomitoformis strain D-401 is a Gram-negative bacterium characterized by its versatile metabolic capabilities. As an autotroph, this organism can synthesize its own organic compounds using inorganic substances, demonstrating lithotrophic and chemotrophic energy acquisition pathways. This flexibility allows it to thrive in various environmental conditions. Strain D-401 is classified as mesophilic, with an optimal growth temperature of 29°C, indicating that it thrives in moderately warm environments. Its temperature range suggests it can flourish in habitats that are neither too hot nor too cold, which is typical for many microorganisms in diverse ecosystems. Genetically, Beggiatoa leptomitoformis strain D-401 has a single replicon, which is a characteristic that can influence its replication and genetic stability. This strain is cataloged under the accession number NZ_CP018889.2, providing a reference for researchers interested in its genomic sequence and further studies. The ecological role of Beggiatoa leptomitoformis strain D-401 is significant as it contributes to nutrient cycling in its environment. By utilizing inorganic compounds as energy sources, it plays a part in the biogeochemical processes, particularly in sulfur cycling, which is vital for maintaining ecosystem health. This bacterium exemplifies the intricate relationships between microbial life and their surroundings, highlighting the importance of understanding microbial metabolism in ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusBeggiatoa
SpeciesBeggiatoa leptomitoformis
Strainstrain D-401

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceautotroph; lithotroph; chemotroph
PathogenicityNot Available

Genome Summary

Beggiatoa leptomitoformis strain D-401 chromosome, complete

Gene Summary

Adenine Count

1266960 bp

Thymine Count

1271872 bp

Guanine Count

860509 bp

Cytosine Count

867009 bp

Genome Length

4266350 bp

Protein-coding Genes

3575 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(5-formylfuran-3-yl)methyl phosphate synthaseBLE401_RS02200Not AvailablePositive512687 - 51338825114.0
Trna-glyNot AvailableNot AvailablePositive513432 - 513507Not Available
Trna-cysNot AvailableNot AvailablePositive513553 - 513626Not Available
exea family proteinBLE401_RS02215Not AvailablePositive514085 - 51590867371.4
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdBLE401_RS02220Not AvailablePositive515954 - 51728549994.2
duf4337 domain-containing proteinBLE401_RS02225Not AvailableNegative517417 - 51804623026.8
class i sam-dependent methyltransferaseBLE401_RS02230Not AvailableNegative518075 - 51883628222.5
glycine zipper 2tm domain-containing proteinBLE401_RS02235Not AvailableNegative518836 - 51928815431.6
ygiq family radical sam proteinBLE401_RS02240Not AvailablePositive519715 - 52189881268.9
duf4398 domain-containing proteinBLE401_RS02245Not AvailablePositive522211 - 52258513904.7

Displaying genes 471 – 480 of 3651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.