Vibrio gazogenes strain ATCC 43942

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes strain ATCC 43942 is a bacterium primarily found in estuarine and marine environments, including estuarine marshes, marine biofilms, and saline habitats. This organism is notable for its adaptability to complex saline conditions, which are characteristic of its natural habitats. The strain possesses two replicons, indicating a potential for genetic diversity and adaptability, which can be advantageous in fluctuating environments. The genetic material of Vibrio gazogenes ATCC 43942 is cataloged under the accession numbers NZ_CP018835.1 and NZ_CP018837.1, allowing for further genomic studies and comparisons with other Vibrio species. Ecologically, the presence of Vibrio gazogenes in marine biofilms suggests its role in the microbial communities associated with these environments. Biofilms are complex structures formed by microbial communities that can influence nutrient cycling, organic matter degradation, and overall ecosystem functions in marine ecosystems. The adaptability of Vibrio gazogenes to saline environments indicates its potential significance in biogeochemical processes within estuarine and marine systems. Understanding the ecological role of this strain can provide insights into microbial interactions and the resilience of marine ecosystems in changing environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
Strainstrain ATCC 43942

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes strain ATCC 43942
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatestuarine; estuarine marshes; Marine; marine biofilms; saline environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes strain ATCC 43942


Gene Summary

Adenine Count

3433 bp

Thymine Count

3102 bp

Guanine Count

2808 bp

Cytosine Count

2573 bp

Genome Length

11916 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin-type n-terminal cleavage/methylation domain-containing proteinBSQ33_RS13270Not AvailablePositive2898366 - 289890220008.2
s-formylglutathione hydrolaseBSQ33_RS13275Not AvailableNegative2898899 - 289975031711.3
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseBSQ33_RS13280Not AvailableNegative2899810 - 290094340148.4
lysr family transcriptional regulatorBSQ33_RS13285Not AvailablePositive2901077 - 290196433420.5
trna adenosine(34) deaminase tadaBSQ33_RS13290Not AvailablePositive2902040 - 290257019927.7
hypothetical proteinBSQ33_RS22120Not AvailableNegative2902799 - 29029305238.55
membrane-bound lytic murein transglycosylase mltfBSQ33_RS13295Not AvailableNegative2903120 - 290468859807.1
phosphoribosylformylglycinamidine synthaseBSQ33_RS13300Not AvailablePositive2904985 - 2908881142091.0
alanine dehydrogenaseBSQ33_RS13305Not AvailablePositive2909194 - 291031239459.8
hypothetical proteinBSQ33_RS13310Not AvailablePositive2910623 - 29108026721.78

Displaying genes 2641 – 2650 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.