Vibrio gazogenes strain ATCC 43942

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes strain ATCC 43942 is a bacterium primarily found in estuarine and marine environments, including estuarine marshes, marine biofilms, and saline habitats. This organism is notable for its adaptability to complex saline conditions, which are characteristic of its natural habitats. The strain possesses two replicons, indicating a potential for genetic diversity and adaptability, which can be advantageous in fluctuating environments. The genetic material of Vibrio gazogenes ATCC 43942 is cataloged under the accession numbers NZ_CP018835.1 and NZ_CP018837.1, allowing for further genomic studies and comparisons with other Vibrio species. Ecologically, the presence of Vibrio gazogenes in marine biofilms suggests its role in the microbial communities associated with these environments. Biofilms are complex structures formed by microbial communities that can influence nutrient cycling, organic matter degradation, and overall ecosystem functions in marine ecosystems. The adaptability of Vibrio gazogenes to saline environments indicates its potential significance in biogeochemical processes within estuarine and marine systems. Understanding the ecological role of this strain can provide insights into microbial interactions and the resilience of marine ecosystems in changing environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
Strainstrain ATCC 43942

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes strain ATCC 43942
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatestuarine; estuarine marshes; Marine; marine biofilms; saline environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes strain ATCC 43942


Gene Summary

Adenine Count

3433 bp

Thymine Count

3102 bp

Guanine Count

2808 bp

Cytosine Count

2573 bp

Genome Length

11916 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium transporter trkaBSQ33_RS09075Not AvailableNegative2011030 - 201240650124.3
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbBSQ33_RS09080Not AvailableNegative2012485 - 201377148045.8
methionyl-trna formyltransferaseBSQ33_RS09085Not AvailableNegative2013823 - 201478835023.0
peptide deformylaseBSQ33_RS09090Not AvailableNegative2014800 - 201532119767.8
dna-processing protein dpraBSQ33_RS09095Not AvailablePositive2015543 - 201665840435.1
duf494 family proteinBSQ33_RS09100Not AvailablePositive2016664 - 201713718425.1
type i dna topoisomeraseBSQ33_RS09105Not AvailablePositive2017148 - 201771721051.1
5-(carboxyamino)imidazole ribonucleotide synthaseBSQ33_RS09110Not AvailableNegative2017822 - 201895241219.3
5-(carboxyamino)imidazole ribonucleotide mutaseBSQ33_RS09115Not AvailableNegative2018958 - 201944316732.5
sua5/ycio/yrdc/ywlc family proteinBSQ33_RS09120Not AvailablePositive2019660 - 202021720168.0

Displaying genes 1811 – 1820 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.