Vibrio gazogenes strain ATCC 43942

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes strain ATCC 43942 is a bacterium primarily found in estuarine and marine environments, including estuarine marshes, marine biofilms, and saline habitats. This organism is notable for its adaptability to complex saline conditions, which are characteristic of its natural habitats. The strain possesses two replicons, indicating a potential for genetic diversity and adaptability, which can be advantageous in fluctuating environments. The genetic material of Vibrio gazogenes ATCC 43942 is cataloged under the accession numbers NZ_CP018835.1 and NZ_CP018837.1, allowing for further genomic studies and comparisons with other Vibrio species. Ecologically, the presence of Vibrio gazogenes in marine biofilms suggests its role in the microbial communities associated with these environments. Biofilms are complex structures formed by microbial communities that can influence nutrient cycling, organic matter degradation, and overall ecosystem functions in marine ecosystems. The adaptability of Vibrio gazogenes to saline environments indicates its potential significance in biogeochemical processes within estuarine and marine systems. Understanding the ecological role of this strain can provide insights into microbial interactions and the resilience of marine ecosystems in changing environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
Strainstrain ATCC 43942

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes strain ATCC 43942
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatestuarine; estuarine marshes; Marine; marine biofilms; saline environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes strain ATCC 43942


Gene Summary

Adenine Count

3433 bp

Thymine Count

3102 bp

Guanine Count

2808 bp

Cytosine Count

2573 bp

Genome Length

11916 bp

Protein-coding Genes

22 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcdaBSQ33_RS04965Not AvailableNegative1073657 - 107446629552.7
murein transglycosylase aBSQ33_RS04970Not AvailableNegative1074570 - 107567340580.4
amino-acid n-acetyltransferaseBSQ33_RS04975Not AvailablePositive1075872 - 107721549475.8
hypothetical proteinBSQ33_RS21945Not AvailablePositive1077494 - 10776797208.73
exodeoxyribonuclease v subunit alphaBSQ33_RS04985Not AvailableNegative1077737 - 107982177348.3
exodeoxyribonuclease v subunit betaBSQ33_RS04990Not AvailableNegative1079818 - 1083447136625.0
exodeoxyribonuclease v subunit gammaBSQ33_RS04995Not AvailableNegative1083776 - 1087279133476.0
lysr substrate-binding domain-containing proteinBSQ33_RS05000Not AvailablePositive1087417 - 108831334224.4
yebg family proteinBSQ33_RS05005Not AvailablePositive1088380 - 108868811387.5
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseBSQ33_RS05010Not AvailablePositive1088892 - 108992035944.9

Displaying genes 1001 – 1010 of 3133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.