Helicobacter pylori PMSS1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PMSS1 is a Gram-negative bacterium characterized by its microaerophilic oxygen requirement and unique spirilla shape. This microorganism is typically found in association with its host, indicating a host-associated habitat. Notably, H. pylori PMSS1 exists as singles rather than in clusters, which is significant for its ecological niche. The bacterium is equipped with flagella, contributing to its motility, although it is categorized as non-motile under specific conditions. It thrives optimally at a temperature of 37°C, fitting within a mesophilic temperature range. H. pylori PMSS1 contains two replicons and is characterized by having two membranes, which is typical for Gram-negative bacteria. The biotic relationship of H. pylori PMSS1 is noted as free-living, suggesting that it can exist independently of a host under certain conditions. However, its association with hosts is crucial for its survival and ecological role. The genetic sequences related to H. pylori PMSS1 are documented in the accessions NZ_CP018823.1 and NZ_CP018824.1, providing a resource for further research into its biology and genetics. Understanding the traits of H. pylori PMSS1 can inform its ecological dynamics, particularly its interactions within the gastrointestinal tract of hosts, where it is known to play a role in various health conditions.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPMSS1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PMSS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PMSS1 chromosome, complete genome.

Gene Summary

Adenine Count

494298 bp

Thymine Count

492733 bp

Guanine Count

317876 bp

Cytosine Count

313573 bp

Genome Length

1618480 bp

Protein-coding Genes

1506 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l13HPYLPMSS1_RS00420Not AvailableNegative81312 - 8173716142.9
duf5408 family proteinHPYLPMSS1_RS00430Not AvailableNegative82090 - 822787250.17
fad-dependent oxidoreductaseHPYLPMSS1_RS00435Not AvailableNegative82284 - 8363650733.2
sh3 domain-containing c40 family peptidaseHPYLPMSS1_RS00440Not AvailableNegative83690 - 8506352351.9
rna polymerase sigma factor rpodHPYLPMSS1_RS00445Not AvailableNegative85083 - 8712578794.9
aminodeoxyfutalosine nucleosidaseHPYLPMSS1_RS00450Not AvailableNegative87348 - 8804325091.4
acp s-malonyltransferaseHPYLPMSS1_RS00455Not AvailableNegative88054 - 8898334358.7
Trna-serNot AvailableNot AvailablePositive89113 - 89204Not Available
type ii restriction endonucleaseHPYLPMSS1_RS00465Not AvailablePositive89410 - 9024032257.4
dna-methyltransferaseHPYLPMSS1_RS00470Not AvailablePositive90237 - 9107031899.3

Displaying genes 81 – 90 of 1554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.