Helicobacter pylori PMSS1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori PMSS1 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and solitary cell arrangement. This strain thrives optimally at 37.0°C, which aligns with the human body temperature, suggesting its adaptation to a host-associated habitat. H. pylori is commonly found in the gastric mucosa of humans and is notable for its ability to survive in the acidic environment of the stomach. The microaerophilic nature of H. pylori PMSS1 indicates that it requires reduced levels of oxygen for growth, which is typical for many bacteria residing in the gastrointestinal tract. This adaptation may play a crucial role in its survival and colonization of the gastric epithelium, where oxygen levels are lower than in the external environment. Furthermore, the solitary arrangement of H. pylori PMSS1 cells may influence its motility and colonization strategies within the host, as individual cells can navigate through the viscous mucus layer of the stomach lining. Understanding the traits of H. pylori PMSS1, including its morphological characteristics and growth requirements, provides insight into its ecological niche as a commensal organism that may contribute to the complex interplay of microorganisms in the human gut.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainPMSS1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori PMSS1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori PMSS1


Gene Summary

Adenine Count

494298 bp

Thymine Count

492733 bp

Guanine Count

317876 bp

Cytosine Count

313573 bp

Genome Length

1618480 bp

Protein-coding Genes

1506 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transcription antitermination factor nusbHPYLPMSS1_RS00005Not Available-47 - 46315520.0
6,7-dimethyl-8-ribityllumazine synthaseHPYLPMSS1_RS00010Not Available-465 - 93516959.7
3-deoxy-8-phosphooctulonate synthaseHPYLPMSS1_RS00015Not Available-945 - 177530357.6
carbonic anhydraseHPYLPMSS1_RS00020Not Available-1762 - 242725698.5
orotidine-5'-phosphate decarboxylaseHPYLPMSS1_RS00025Not Available+2549 - 323225368.2
pantoate--beta-alanine ligaseHPYLPMSS1_RS00030Not Available+3233 - 406331009.9
Trna-gluNot AvailableNot Available+4077 - 4152Not Available
Trna-aspNot AvailableNot Available+4225 - 4301Not Available
Trna-valNot AvailableNot Available+4342 - 4417Not Available
Trna-gluNot AvailableNot Available+4459 - 4533Not Available

Displaying genes 1 – 10 of 1554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites