Histophilus somni strain USDA-ARS-USMARC-63255

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni strain USDA-ARS-USMARC-63255 is a Gram-negative, rod-shaped bacterium associated with the hosts Bos taurus and Bos, commonly known as cattle. This organism exhibits a mesophilic growth pattern, thriving optimally at a temperature of 35°C and is capable of functioning as both an aerobe and a facultative anaerobe. This strain is significant in the context of cattle health, as it is implicated in various respiratory diseases, including pneumonia, bovine respiratory disease (BRD), and the broader bovine respiratory disease complex (BRDC). These health issues are particularly concerning in livestock management, as they can lead to increased morbidity and mortality rates in affected herds, impacting both animal welfare and agricultural productivity. Histophilus somni has a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. The accession number for this strain is NZ_CP018803.1, which provides a reference for genetic and genomic studies related to its pathogenicity and environmental interactions. The ecological role of Histophilus somni in cattle highlights the importance of understanding host-associated bacteria in livestock. Its presence in the respiratory system of cattle indicates a complex relationship that may influence disease dynamics, immunity, and overall herd health. This underscores the need for ongoing research into management practices that can mitigate the impact of such pathogens in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
Strainstrain USDA-ARS-USMARC-63255

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain USDA-ARS-USMARC-63255 chromosome,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
disulfide bond formation protein dsbbBTV19_RS07030Not AvailableNegative1525276 - 152580920364.0
fatty acid metabolism transcriptional regulator fadrBTV19_RS07035Not AvailablePositive1526000 - 152671927622.9
pyridoxal phosphate-dependent aminotransferaseBTV19_RS07040Not AvailableNegative1526764 - 152797845391.1
isochorismate synthase menfBTV19_RS07045Not AvailablePositive1528130 - 152941349264.2
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseBTV19_RS07050Not AvailablePositive1529419 - 153112563773.8
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseBTV19_RS07055Not AvailablePositive1531141 - 153189629181.1
efflux rnd transporter permease subunitBTV19_RS07060Not AvailableNegative1531922 - 1535038112343.0
efflux rnd transporter periplasmic adaptor subunitBTV19_RS07065Not AvailableNegative1535060 - 153627444139.9
3-phosphoshikimate 1-carboxyvinyltransferaseBTV19_RS07070Not AvailableNegative1536507 - 153780547439.3
histidinol-phosphate transaminaseBTV19_RS07075Not AvailableNegative1537868 - 153897741532.9

Displaying genes 1461 – 1470 of 2014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total