Mariprofundus aestuarium strain CP-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Mariprofundales

Family

Mariprofundaceae

Genus

Mariprofundus

Description

Mariprofundus aestuarium strain CP-5 is characterized by having a single replicon, which distinguishes it in the context of genomic organization. The strain is documented under the accession number NZ_CP018799.1, indicating its availability in genomic databases for further study and reference. This strain is part of the broader genus Mariprofundus, which is known for its ecological roles in marine environments, particularly in biofilm formation on surfaces submerged in seawater. The single replicon trait may suggest a streamlined genetic architecture, which could be advantageous for survival in fluctuating environmental conditions typical of estuarine ecosystems. The genomic characteristics of Mariprofundus aestuarium strain CP-5 could provide insights into its metabolic capabilities and ecological interactions, especially in nutrient cycling and biogeochemical processes within its habitat. Understanding the genetic framework of this strain may yield valuable information regarding its adaptability and functional roles in marine microbiomes. Overall, the study of Mariprofundus aestuarium strain CP-5 contributes to our knowledge of microbial diversity and ecological dynamics in the oceans, emphasizing the importance of genomic traits in understanding microbial life in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassCandidatius Mariprofundia
OrderMariprofundales
FamilyMariprofundaceae
GenusMariprofundus
SpeciesMariprofundus aestuarium
Strainstrain CP-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatredox-stratified water columns
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariprofundus aestuarium strain CP-5 chromosome, complete genome.

Gene Summary

Adenine Count

617093 bp

Thymine Count

613992 bp

Guanine Count

651427 bp

Cytosine Count

655098 bp

Genome Length

2537610 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGa0123461_RS01455Not AvailableNegative282131 - 2823226892.21
efflux rnd transporter permease subunitGa0123461_RS01460Not AvailablePositive282548 - 28501391953.9
fad-dependent oxidoreductaseGa0123461_RS01465Not AvailableNegative285081 - 28759190384.0
rna polymerase sigma factor rpod/sigaGa0123461_RS01470Not AvailableNegative287880 - 28869831163.3
duf2934 domain-containing proteinGa0123461_RS01475Not AvailableNegative288769 - 2889667363.9
methyltransferase domain-containing proteinGa0123461_RS01480Not AvailablePositive289230 - 29003930584.7
glutamate--trna ligaseGa0123461_RS01485Not AvailablePositive290302 - 29169050652.2
50s ribosomal protein l11 methyltransferaseGa0123461_RS01490Not AvailableNegative291775 - 29263230703.4
hydrogenaseGa0123461_RS01495Not AvailablePositive292711 - 29340325170.3
holliday junction resolvase ruvxGa0123461_RS01500Not AvailablePositive293375 - 29389919205.3

Displaying genes 291 – 300 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.