Mariprofundus aestuarium strain CP-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Mariprofundales

Family

Mariprofundaceae

Genus

Mariprofundus

Description

Mariprofundus aestuarium strain CP-5 is characterized by having a single replicon, which distinguishes it in the context of genomic organization. The strain is documented under the accession number NZ_CP018799.1, indicating its availability in genomic databases for further study and reference. This strain is part of the broader genus Mariprofundus, which is known for its ecological roles in marine environments, particularly in biofilm formation on surfaces submerged in seawater. The single replicon trait may suggest a streamlined genetic architecture, which could be advantageous for survival in fluctuating environmental conditions typical of estuarine ecosystems. The genomic characteristics of Mariprofundus aestuarium strain CP-5 could provide insights into its metabolic capabilities and ecological interactions, especially in nutrient cycling and biogeochemical processes within its habitat. Understanding the genetic framework of this strain may yield valuable information regarding its adaptability and functional roles in marine microbiomes. Overall, the study of Mariprofundus aestuarium strain CP-5 contributes to our knowledge of microbial diversity and ecological dynamics in the oceans, emphasizing the importance of genomic traits in understanding microbial life in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassCandidatius Mariprofundia
OrderMariprofundales
FamilyMariprofundaceae
GenusMariprofundus
SpeciesMariprofundus aestuarium
Strainstrain CP-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatredox-stratified water columns
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariprofundus aestuarium strain CP-5 chromosome, complete genome.

Gene Summary

Adenine Count

617093 bp

Thymine Count

613992 bp

Guanine Count

651427 bp

Cytosine Count

655098 bp

Genome Length

2537610 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenosylhomocysteinaseGa0123461_RS11435Not AvailablePositive2377591 - 237899751592.4
hypothetical proteinGa0123461_RS11440Not AvailablePositive2379023 - 23793019916.62
m48 family metallopeptidaseGa0123461_RS11445Not AvailableNegative2379350 - 238066348745.7
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseGa0123461_RS11450Not AvailableNegative2380685 - 238166233731.1
3-dehydroquinate synthaseGa0123461_RS11455Not AvailableNegative2381750 - 238286240469.9
peptide-methionine (r)-s-oxide reductase msrbGa0123461_RS11460Not AvailableNegative2382907 - 238339818281.6
peptide-methionine (s)-s-oxide reductase msraGa0123461_RS11465Not AvailableNegative2383391 - 238398722522.6
nad(p)/fad-dependent oxidoreductaseGa0123461_RS11470Not AvailablePositive2384091 - 238527843070.3
sigma-54-dependent transcriptional regulatorGa0123461_RS11475Not AvailableNegative2385444 - 238684752085.3
two-component system sensor histidine kinase ntrbGa0123461_RS11480Not AvailableNegative2386847 - 238789939073.2

Displaying genes 2301 – 2310 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.