Mariprofundus aestuarium strain CP-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Mariprofundales

Family

Mariprofundaceae

Genus

Mariprofundus

Description

Mariprofundus aestuarium strain CP-5 is characterized by having a single replicon, which distinguishes it in the context of genomic organization. The strain is documented under the accession number NZ_CP018799.1, indicating its availability in genomic databases for further study and reference. This strain is part of the broader genus Mariprofundus, which is known for its ecological roles in marine environments, particularly in biofilm formation on surfaces submerged in seawater. The single replicon trait may suggest a streamlined genetic architecture, which could be advantageous for survival in fluctuating environmental conditions typical of estuarine ecosystems. The genomic characteristics of Mariprofundus aestuarium strain CP-5 could provide insights into its metabolic capabilities and ecological interactions, especially in nutrient cycling and biogeochemical processes within its habitat. Understanding the genetic framework of this strain may yield valuable information regarding its adaptability and functional roles in marine microbiomes. Overall, the study of Mariprofundus aestuarium strain CP-5 contributes to our knowledge of microbial diversity and ecological dynamics in the oceans, emphasizing the importance of genomic traits in understanding microbial life in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassCandidatius Mariprofundia
OrderMariprofundales
FamilyMariprofundaceae
GenusMariprofundus
SpeciesMariprofundus aestuarium
Strainstrain CP-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatredox-stratified water columns
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariprofundus aestuarium strain CP-5 chromosome, complete genome.

Gene Summary

Adenine Count

617093 bp

Thymine Count

613992 bp

Guanine Count

651427 bp

Cytosine Count

655098 bp

Genome Length

2537610 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m48 family metalloproteaseGa0123461_RS09890Not AvailablePositive2048655 - 204948829895.9
hypothetical proteinGa0123461_RS12415Not AvailableNegative2049689 - 20498355525.54
hypothetical proteinGa0123461_RS09900Not AvailableNegative2050254 - 205090424379.8
hypothetical proteinGa0123461_RS12420Not AvailableNegative2051078 - 20512335538.52
radical sam proteinGa0123461_RS09905Not AvailableNegative2051336 - 205221732435.4
ribosome small subunit-dependent gtpase aGa0123461_RS09910Not AvailableNegative2052495 - 205355639533.6
ygjp-like metallopeptidase domain-containing proteinGa0123461_RS09915Not AvailablePositive2053786 - 205431320302.8
hypothetical proteinGa0123461_RS09920Not AvailablePositive2054419 - 20546558912.6
duf3817 domain-containing proteinGa0123461_RS09925Not AvailablePositive2054751 - 205503811024.8
dinb family proteinGa0123461_RS09930Not AvailableNegative2055152 - 205572721622.7

Displaying genes 1991 – 2000 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.