Mariprofundus aestuarium strain CP-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Mariprofundales

Family

Mariprofundaceae

Genus

Mariprofundus

Description

Mariprofundus aestuarium strain CP-5 is characterized by having a single replicon, which distinguishes it in the context of genomic organization. The strain is documented under the accession number NZ_CP018799.1, indicating its availability in genomic databases for further study and reference. This strain is part of the broader genus Mariprofundus, which is known for its ecological roles in marine environments, particularly in biofilm formation on surfaces submerged in seawater. The single replicon trait may suggest a streamlined genetic architecture, which could be advantageous for survival in fluctuating environmental conditions typical of estuarine ecosystems. The genomic characteristics of Mariprofundus aestuarium strain CP-5 could provide insights into its metabolic capabilities and ecological interactions, especially in nutrient cycling and biogeochemical processes within its habitat. Understanding the genetic framework of this strain may yield valuable information regarding its adaptability and functional roles in marine microbiomes. Overall, the study of Mariprofundus aestuarium strain CP-5 contributes to our knowledge of microbial diversity and ecological dynamics in the oceans, emphasizing the importance of genomic traits in understanding microbial life in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassCandidatius Mariprofundia
OrderMariprofundales
FamilyMariprofundaceae
GenusMariprofundus
SpeciesMariprofundus aestuarium
Strainstrain CP-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatredox-stratified water columns
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariprofundus aestuarium strain CP-5 chromosome, complete genome.

Gene Summary

Adenine Count

617093 bp

Thymine Count

613992 bp

Guanine Count

651427 bp

Cytosine Count

655098 bp

Genome Length

2537610 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinGa0123461_RS09345Not AvailablePositive1930609 - 193141830392.6
Trna-aspNot AvailableNot AvailablePositive1931754 - 1931830Not Available
Trna-valNot AvailableNot AvailablePositive1931855 - 1931930Not Available
Trna-aspNot AvailableNot AvailablePositive1931997 - 1932073Not Available
Trna-valNot AvailableNot AvailablePositive1932174 - 1932249Not Available
hu family dna-binding proteinGa0123461_RS09370Not AvailableNegative1932306 - 19325788835.53
endopeptidase laGa0123461_RS09375Not AvailableNegative1932666 - 193509890171.5
atp-dependent clp protease atp-binding subunit clpxGa0123461_RS09380Not AvailableNegative1935178 - 193644946208.8
atp-dependent clp endopeptidase proteolytic subunit clppGa0123461_RS09385Not AvailableNegative1936433 - 193705322654.2
trigger factorGa0123461_RS09390Not AvailableNegative1937208 - 193853348778.2

Displaying genes 1881 – 1890 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.