Mariprofundus aestuarium strain CP-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Candidatius Mariprofundia

Order

Mariprofundales

Family

Mariprofundaceae

Genus

Mariprofundus

Description

Mariprofundus aestuarium strain CP-5 is characterized by having a single replicon, which distinguishes it in the context of genomic organization. The strain is documented under the accession number NZ_CP018799.1, indicating its availability in genomic databases for further study and reference. This strain is part of the broader genus Mariprofundus, which is known for its ecological roles in marine environments, particularly in biofilm formation on surfaces submerged in seawater. The single replicon trait may suggest a streamlined genetic architecture, which could be advantageous for survival in fluctuating environmental conditions typical of estuarine ecosystems. The genomic characteristics of Mariprofundus aestuarium strain CP-5 could provide insights into its metabolic capabilities and ecological interactions, especially in nutrient cycling and biogeochemical processes within its habitat. Understanding the genetic framework of this strain may yield valuable information regarding its adaptability and functional roles in marine microbiomes. Overall, the study of Mariprofundus aestuarium strain CP-5 contributes to our knowledge of microbial diversity and ecological dynamics in the oceans, emphasizing the importance of genomic traits in understanding microbial life in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassCandidatius Mariprofundia
OrderMariprofundales
FamilyMariprofundaceae
GenusMariprofundus
SpeciesMariprofundus aestuarium
Strainstrain CP-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatredox-stratified water columns
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mariprofundus aestuarium strain CP-5 chromosome, complete genome.

Gene Summary

Adenine Count

617093 bp

Thymine Count

613992 bp

Guanine Count

651427 bp

Cytosine Count

655098 bp

Genome Length

2537610 bp

Protein-coding Genes

2409 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-basal body complex protein flieGa0123461_RS00655Not AvailableNegative126036 - 12632310343.5
flagellar basal body rod protein flgcGa0123461_RS00660Not AvailableNegative126408 - 12685416250.1
flagellar basal body rod protein flgbGa0123461_RS00665Not AvailableNegative126854 - 12724314425.0
sigma-54 interaction domain-containing proteinGa0123461_RS00670Not AvailableNegative127287 - 12863949820.2
tetratricopeptide repeat proteinGa0123461_RS00675Not AvailableNegative128636 - 13060374793.9
hypothetical proteinGa0123461_RS00680Not AvailablePositive130744 - 13120517365.2
adenylate/guanylate cyclase domain-containing proteinGa0123461_RS00685Not AvailableNegative131263 - 13265749636.2
motility protein aGa0123461_RS00690Not AvailablePositive132829 - 13367731432.4
flagellar motor protein motbGa0123461_RS00695Not AvailablePositive133689 - 13443526833.9
sigma-54-dependent transcriptional regulatorGa0123461_RS00700Not AvailableNegative134469 - 13586352098.4

Displaying genes 131 – 140 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.