Pseudomonas putida strain DRA525

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DRA525 is a Gram-negative, rod-shaped, and facultatively aerobic bacterium that thrives in soil and wastewater environments. As a heterotroph, it derives energy from organic compounds, demonstrating its adaptability to various ecological niches. This strain is characterized by its mobility, facilitated by the presence of flagella, and it exists predominantly as single cells. With a mesophilic temperature range, Pseudomonas putida DRA525 can grow optimally at moderate temperatures, making it suitable for diverse habitats. The bacterium features a unique cellular structure, comprising two membranes and a single replicon. Its ecological role is significant as it is free-living and interacts with a variety of hosts, including Homo sapiens, various plant species such as Triticum aestivum (wheat), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. While it plays a vital role in soil health and plant interactions, Pseudomonas putida DRA525 is also associated with nosocomial infections in animals, indicating its potential pathogenicity. This dual nature highlights the complexity of microbial interactions in the environment, where beneficial traits can coexist with harmful effects. Understanding the ecological and biological characteristics of this strain is crucial for managing its presence in both natural and clinical settings, emphasizing the need for careful monitoring of its impact on health and ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DRA525

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DRA525
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DRA525 chromosome.

Gene Summary

Adenine Count

1164946 bp

Thymine Count

1163410 bp

Guanine Count

1964319 bp

Cytosine Count

1970556 bp

Genome Length

6267580 bp

Protein-coding Genes

5502 genes

Non-Coding Genes

205 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseBL240_RS28505Not AvailableNegative6167483 - 616841532957.8
peptide deformylaseBL240_RS28510Not AvailableNegative6168476 - 616898219411.3
dna-processing protein dpraBL240_RS28515Not AvailablePositive6169190 - 617028738518.3
l-threonylcarbamoyladenylate synthaseBL240_RS28520Not AvailablePositive6170330 - 617088720492.6
hypothetical proteinBL240_RS28525Not AvailablePositive6171331 - 617164211295.5
nadph:quinone reductaseBL240_RS28530Not AvailableNegative6172040 - 617301734224.1
oxygen-dependent coproporphyrinogen oxidaseBL240_RS28535Not AvailablePositive6173152 - 617406334379.2
shikimate dehydrogenaseBL240_RS28540Not AvailablePositive6174089 - 617491329323.1
sulp family inorganic anion transporterBL240_RS28545Not AvailableNegative6175052 - 617661756005.5
choline abc transporter substrate-binding proteinBL240_RS28550Not AvailableNegative6176747 - 617767633827.6

Displaying genes 5611 – 5620 of 5707 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total