Pseudomonas putida strain DRA525

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DRA525 is a Gram-negative, rod-shaped, and facultatively aerobic bacterium that thrives in soil and wastewater environments. As a heterotroph, it derives energy from organic compounds, demonstrating its adaptability to various ecological niches. This strain is characterized by its mobility, facilitated by the presence of flagella, and it exists predominantly as single cells. With a mesophilic temperature range, Pseudomonas putida DRA525 can grow optimally at moderate temperatures, making it suitable for diverse habitats. The bacterium features a unique cellular structure, comprising two membranes and a single replicon. Its ecological role is significant as it is free-living and interacts with a variety of hosts, including Homo sapiens, various plant species such as Triticum aestivum (wheat), Solanum lycopersicum (tomato), and Oryza sativa (rice), among others. While it plays a vital role in soil health and plant interactions, Pseudomonas putida DRA525 is also associated with nosocomial infections in animals, indicating its potential pathogenicity. This dual nature highlights the complexity of microbial interactions in the environment, where beneficial traits can coexist with harmful effects. Understanding the ecological and biological characteristics of this strain is crucial for managing its presence in both natural and clinical settings, emphasizing the need for careful monitoring of its impact on health and ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DRA525

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DRA525
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DRA525 chromosome.

Gene Summary

Adenine Count

1164946 bp

Thymine Count

1163410 bp

Guanine Count

1964319 bp

Cytosine Count

1970556 bp

Genome Length

6267580 bp

Protein-coding Genes

5502 genes

Non-Coding Genes

205 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyhydroxyalkanoic acid system family proteinBL240_RS26195Not AvailableNegative5649286 - 564956110087.2
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieBL240_RS26200Not AvailablePositive5649686 - 565045628441.3
scp2 domain-containing proteinBL240_RS26205Not AvailablePositive5650456 - 565107922901.6
ubiquinone biosynthesis regulatory protein kinase ubibBL240_RS26210Not AvailablePositive5651076 - 565269561390.3
phosphoribosyl-amp cyclohydrolaseBL240_RS26215Not AvailablePositive5652768 - 565316015012.0
phosphoribosyl-atp diphosphataseBL240_RS26220Not AvailablePositive5653162 - 565349712286.4
twin-arginine translocase tata/tate family subunitBL240_RS26230Not AvailablePositive5653667 - 565393910003.9
sec-independent protein translocase protein tatbBL240_RS26235Not AvailablePositive5653943 - 565432013585.6
twin-arginine translocase subunit tatcBL240_RS26240Not AvailablePositive5654317 - 565510529268.6
16s rrna (uracil(1498)-n(3))-methyltransferaseBL240_RS26245Not AvailablePositive5655102 - 565580926078.2

Displaying genes 5151 – 5160 of 5707 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total