Streptomyces hygroscopicus strain XM201

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus strain XM201 is a significant microorganism primarily isolated from heavy metal-contaminated soil in a mangrove environment. This strain exhibits a notable ability to thrive in challenging ecological conditions, characterized by the presence of heavy metals, which can be toxic to many other microbial species. One of the defining features of XM201 is the presence of true flagella, which likely contributes to its motility and adaptability in its habitat. The flagella may play a role in the bacterium's ability to navigate through the complex soil matrix, allowing it to access nutrients and evade potential threats within its environment. Genetically, XM201 possesses a single replicon, indicating a streamlined genetic structure which may enhance its adaptability and survival in contaminated soils. This genetic characteristic might facilitate efficient replication and expression of genes necessary for stress resistance and metabolic functions pertinent to its ecological niche. The accession number for this strain is NZ_CP018627.1, which provides a reference for further genomic studies and potential applications. The isolation of Streptomyces hygroscopicus strain XM201 from a mangrove habitat underscores its ecological significance, particularly in bioremediation efforts. Its ability to survive and possibly metabolize heavy metals suggests a potential role in the detoxification of contaminated environments, highlighting the ecological value of microbial diversity in managing pollution in sensitive ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainstrain XM201

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus strain XM201
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus strain XM201 chromosome, complete

Gene Summary

Adenine Count

1759734 bp

Thymine Count

1753822 bp

Guanine Count

4255477 bp

Cytosine Count

4243182 bp

Genome Length

12012215 bp

Protein-coding Genes

10094 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ei24 domain-containing proteinSHXM_RS20410Not AvailableNegative4840659 - 484146228814.5
jacalin-like lectinSHXM_RS20415Not AvailableNegative4841481 - 484286647889.7
php domain-containing proteinSHXM_RS20420Not AvailablePositive4842960 - 484467261220.4
polysaccharide lyase family 1 proteinSHXM_RS20425Not AvailableNegative4844752 - 484586438536.3
intradiol ring-cleavage dioxygenaseSHXM_RS20430Not AvailablePositive4846187 - 484697827055.9
alpha-n-arabinofuranosidaseSHXM_RS20435Not AvailableNegative4847051 - 484858356099.1
hypothetical proteinSHXM_RS20440Not AvailableNegative4849296 - 484969414251.7
glycoside hydrolase family 30 proteinSHXM_RS20445Not AvailablePositive4849907 - 485130750151.3
nadp-dependent oxidoreductaseSHXM_RS20450Not AvailableNegative4851389 - 485240836240.5
marr family winged helix-turn-helix transcriptional regulatorSHXM_RS20455Not AvailablePositive4852497 - 485292515776.0

Displaying genes 4211 – 4220 of 10265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.