Paenibacillus xylanexedens strain PAMC 22703

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus xylanexedens strain PAMC 22703 is a bacterial species characterized by its possession of two replicons, which are essential for its genetic stability and adaptability. The strain is identified by the accession numbers NZ_CP018620.1 and NZ_CP018621.1, indicating its genomic sequences are publicly available for study. As a member of the Paenibacillus genus, P. xylanexedens is notable for its potential role in the degradation of xylan, a significant component of plant cell walls. This capability suggests that the strain may contribute to the breakdown of lignocellulosic biomass, making it of interest in biotechnological applications, particularly in the fields of biofuel production and waste management. The presence of two replicons indicates a complex genomic architecture that could enhance its metabolic versatility and resilience in various environments. This trait may provide P. xylanexedens with advantages in nutrient-rich habitats, allowing it to thrive in diverse ecological niches. In summary, the characteristics of Paenibacillus xylanexedens strain PAMC 22703, particularly its dual replicons and xylan-degrading abilities, highlight its potential ecological role in biomass decomposition and its applications in sustainable practices. Further research on this strain could unveil its contributions to nutrient cycling and its utility in biotechnological innovations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus xylanexedens
Strainstrain PAMC 22703

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus xylanexedens strain PAMC 22703 chromosome, complete

Gene Summary

Adenine Count

1914247 bp

Thymine Count

1897991 bp

Guanine Count

1638311 bp

Cytosine Count

1603073 bp

Genome Length

7053622 bp

Protein-coding Genes

5926 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homocysteine s-methyltransferaseBS614_RS13800Not AvailableNegative3084446 - 308477512433.1
lysr family transcriptional regulatorBS614_RS13805Not AvailablePositive3084922 - 308582433783.3
spermidine synthaseBS614_RS13810Not AvailablePositive3085984 - 308672127400.4
sensor domain-containing diguanylate cyclaseBS614_RS13815Not AvailablePositive3086886 - 308850260270.4
winged helix-turn-helix transcriptional regulatorBS614_RS13820Not AvailableNegative3088553 - 308891513701.7
doxx family proteinBS614_RS13825Not AvailableNegative3089135 - 308948211761.8
gfo/idh/moca family proteinBS614_RS13830Not AvailableNegative3089584 - 309057636101.2
Trna-leuNot AvailableNot AvailablePositive3090802 - 3090885Not Available
hypothetical proteinBS614_RS13840Not AvailableNegative3090991 - 30911766407.12
sn-glycerol-1-phosphate dehydrogenaseBS614_RS13845Not AvailablePositive3091335 - 309248941442.9

Displaying genes 2771 – 2780 of 6194 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.