Paenibacillus xylanexedens strain PAMC 22703

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus xylanexedens strain PAMC 22703 is a bacterial species characterized by its possession of two replicons, which are essential for its genetic stability and adaptability. The strain is identified by the accession numbers NZ_CP018620.1 and NZ_CP018621.1, indicating its genomic sequences are publicly available for study. As a member of the Paenibacillus genus, P. xylanexedens is notable for its potential role in the degradation of xylan, a significant component of plant cell walls. This capability suggests that the strain may contribute to the breakdown of lignocellulosic biomass, making it of interest in biotechnological applications, particularly in the fields of biofuel production and waste management. The presence of two replicons indicates a complex genomic architecture that could enhance its metabolic versatility and resilience in various environments. This trait may provide P. xylanexedens with advantages in nutrient-rich habitats, allowing it to thrive in diverse ecological niches. In summary, the characteristics of Paenibacillus xylanexedens strain PAMC 22703, particularly its dual replicons and xylan-degrading abilities, highlight its potential ecological role in biomass decomposition and its applications in sustainable practices. Further research on this strain could unveil its contributions to nutrient cycling and its utility in biotechnological innovations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus xylanexedens
Strainstrain PAMC 22703

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus xylanexedens strain PAMC 22703 chromosome, complete

Gene Summary

Adenine Count

1914247 bp

Thymine Count

1897991 bp

Guanine Count

1638311 bp

Cytosine Count

1603073 bp

Genome Length

7053622 bp

Protein-coding Genes

5926 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pd-(d/e)xk nuclease family proteinBS614_RS09590Not AvailablePositive2194298 - 219521536587.1
alanine dehydrogenaseBS614_RS09595Not AvailableNegative2195375 - 219650839314.6
pucr family transcriptional regulatorBS614_RS09600Not AvailablePositive2196698 - 219836863685.3
hypothetical proteinBS614_RS31445Not AvailableNegative2198428 - 219871810727.8
hypothetical proteinBS614_RS09605Not AvailablePositive2199037 - 220110678265.7
sigma-54 interaction domain-containing proteinBS614_RS09610Not AvailableNegative2201154 - 220286363983.0
collagen-like proteinBS614_RS31450Not AvailablePositive2203315 - 220476945718.0
yvtn family beta-propeller repeat-containing proteinBS614_RS09625Not AvailablePositive2204853 - 220656855926.0
proline dehydrogenase family proteinBS614_RS09630Not AvailableNegative2206783 - 220770635223.4
l-glutamate gamma-semialdehyde dehydrogenaseBS614_RS09635Not AvailablePositive2208027 - 220957456406.1

Displaying genes 1961 – 1970 of 6194 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.