Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BJD13_RS06340 | Not Available | Positive | 1071443 - 1072720 | 46438.9 |
| hypothetical protein | BJD13_RS06345 | Not Available | Positive | 1072807 - 1073091 | 9860.84 |
| hypothetical protein | BJD13_RS06350 | Not Available | Positive | 1073372 - 1074055 | 24906.4 |
| eal domain-containing protein | BJD13_RS06355 | Not Available | Negative | 1074524 - 1077310 | 104224.0 |
| pas domain s-box protein | BJD13_RS06360 | Not Available | Positive | 1077431 - 1079563 | 78562.9 |
| eal domain-containing protein | BJD13_RS06365 | Not Available | Positive | 1079567 - 1081288 | 63996.8 |
| atp-binding protein | BJD13_RS06370 | Not Available | Negative | 1081403 - 1082629 | 45772.6 |
| flagella protein | BJD13_RS06375 | Not Available | Negative | 1082795 - 1083127 | 12122.4 |
| flagellar biosynthesis anti-sigma factor flgm | BJD13_RS06380 | Not Available | Negative | 1083143 - 1083454 | 10730.5 |
| flagellar basal body p-ring formation chaperone flga | BJD13_RS06385 | Not Available | Negative | 1083521 - 1084165 | 22458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
