Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS24595 | Not Available | Positive | 1034520 - 1034684 | 5879.11 |
| molybdopterin-synthase adenylyltransferase moeb | BJD13_RS06195 | Not Available | Positive | 1034707 - 1035912 | 42496.8 |
| gephyrin-like molybdotransferase glp | BJD13_RS06200 | Not Available | Negative | 1036252 - 1037472 | 42985.0 |
| ribosome biogenesis gtpase der | BJD13_RS06205 | Not Available | Negative | 1037775 - 1039172 | 51261.2 |
| outer membrane protein assembly factor bamb | BJD13_RS06210 | Not Available | Negative | 1039183 - 1040400 | 42577.7 |
| yfgm family protein | BJD13_RS06215 | Not Available | Negative | 1040400 - 1041038 | 22960.5 |
| helix-turn-helix domain-containing protein | BJD13_RS06220 | Not Available | Negative | 1041109 - 1041969 | 30190.0 |
| type iv pilus biogenesis/stability protein pilw | BJD13_RS06225 | Not Available | Negative | 1041966 - 1042754 | 27360.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | BJD13_RS06230 | Not Available | Negative | 1042765 - 1043958 | 44475.5 |
| nucleoside-diphosphate kinase | BJD13_RS06235 | Not Available | Negative | 1043989 - 1044414 | 15258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
