Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS05745 | Not Available | Negative | 919231 - 919527 | 10689.9 |
| hypothetical protein | BJD13_RS05750 | Not Available | Negative | 919856 - 920581 | 27584.6 |
| hypothetical protein | BJD13_RS24930 | Not Available | Negative | 920571 - 920711 | 5427.38 |
| hypothetical protein | BJD13_RS05755 | Not Available | Negative | 920708 - 920893 | 7058.53 |
| hypothetical protein | BJD13_RS24580 | Not Available | Negative | 920893 - 921075 | 6384.8 |
| hypothetical protein | BJD13_RS05760 | Not Available | Positive | 921229 - 921627 | 14234.2 |
| hypothetical protein | BJD13_RS25135 | Not Available | Positive | 921742 - 922137 | 14644.6 |
| sensor histidine kinase | BJD13_RS05770 | Not Available | Negative | 922683 - 925736 | 111319.0 |
| hypothetical protein | BJD13_RS05775 | Not Available | Negative | 926157 - 926543 | 13591.2 |
| response regulator | BJD13_RS05780 | Not Available | Negative | 926683 - 927285 | 21832.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
