Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | BJD13_RS05610 | Not Available | Positive | 901629 - 903155 | 54192.1 |
| sdr family nad(p)-dependent oxidoreductase | BJD13_RS05615 | Not Available | Positive | 903209 - 904012 | 28434.1 |
| sulfite exporter taue/safe family protein | BJD13_RS05620 | Not Available | Negative | 904180 - 904941 | 25318.7 |
| tigr01244 family sulfur transferase | BJD13_RS05625 | Not Available | Negative | 904966 - 905406 | 15435.6 |
| duf6691 family protein | BJD13_RS05630 | Not Available | Negative | 905403 - 905834 | 14843.6 |
| yeee/yede family protein | BJD13_RS05635 | Not Available | Negative | 905831 - 906271 | 14333.2 |
| mbl fold metallo-hydrolase | BJD13_RS05640 | Not Available | Negative | 906268 - 907134 | 31353.2 |
| arsr/smtb family transcription factor | BJD13_RS05645 | Not Available | Positive | 907389 - 907697 | 11371.8 |
| alpha/beta hydrolase | BJD13_RS05655 | Not Available | Negative | 908250 - 909275 | 36459.4 |
| nfed family protein | BJD13_RS05660 | Not Available | Positive | 909386 - 909970 | 20839.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
