Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BJD13_RS05005 | Not Available | Positive | 773084 - 773974 | 32556.6 |
| nad(p)/fad-dependent oxidoreductase | BJD13_RS05010 | Not Available | Negative | 774131 - 775351 | 42856.6 |
| 2fe-2s iron-sulfur cluster-binding protein | BJD13_RS05015 | Not Available | Negative | 775374 - 775682 | 10830.9 |
| cytochrome p450 | BJD13_RS05020 | Not Available | Negative | 775692 - 776873 | 43748.0 |
| helix-turn-helix domain-containing protein | BJD13_RS05025 | Not Available | Negative | 777006 - 777917 | 33705.1 |
| yeih family protein | BJD13_RS05030 | Not Available | Negative | 778100 - 779230 | 38711.2 |
| lysr family transcriptional regulator | BJD13_RS05035 | Not Available | Positive | 779346 - 780269 | 33077.3 |
| hypothetical protein | BJD13_RS05040 | Not Available | Negative | 780479 - 781099 | 21828.1 |
| cache 3/cache 2 fusion domain-containing protein | BJD13_RS05045 | Not Available | Negative | 781144 - 782271 | 41035.5 |
| response regulator | BJD13_RS05050 | Not Available | Negative | 782526 - 783167 | 23134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
