Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | BJD13_RS04705 | Not Available | Negative | 705205 - 706356 | 40416.4 |
| cytochrome ubiquinol oxidase subunit i | BJD13_RS04710 | Not Available | Negative | 706373 - 707995 | 59918.6 |
| thiol reductant abc exporter subunit cydd | BJD13_RS04715 | Not Available | Positive | 708147 - 709883 | 61411.2 |
| thiol reductant abc exporter subunit cydc | BJD13_RS04720 | Not Available | Positive | 709880 - 711565 | 59295.4 |
| duf1294 domain-containing protein | BJD13_RS04725 | Not Available | Negative | 711638 - 712252 | 22704.6 |
| homoserine o-acetyltransferase metx | BJD13_RS04730 | Not Available | Negative | 712404 - 713606 | 43127.1 |
| tetratricopeptide repeat protein | BJD13_RS04735 | Not Available | Negative | 713908 - 714921 | 35671.0 |
| cytochrome c-type biogenesis protein | BJD13_RS04740 | Not Available | Negative | 714921 - 715352 | 16208.7 |
| dsbe family thiol:disulfide interchange protein | BJD13_RS04745 | Not Available | Negative | 715349 - 715951 | 21989.8 |
| heme lyase ccmf/nrfe family subunit | BJD13_RS04750 | Not Available | Negative | 715944 - 717881 | 69680.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
