Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BJD13_RS04605 | Not Available | Negative | 683157 - 684407 | 43484.6 |
| sufe family protein | BJD13_RS04610 | Not Available | Negative | 684404 - 684841 | 16116.0 |
| cysteine--trna ligase | BJD13_RS04615 | Not Available | Negative | 685106 - 686530 | 51487.0 |
| hypothetical protein | BJD13_RS04620 | Not Available | Positive | 686708 - 687202 | 18392.1 |
| n-acetylornithine carbamoyltransferase | BJD13_RS04625 | Not Available | Positive | 687515 - 688546 | 38250.7 |
| argininosuccinate synthase | BJD13_RS04630 | Not Available | Positive | 688598 - 689836 | 44944.4 |
| gnat family n-acetyltransferase | BJD13_RS04635 | Not Available | Positive | 690077 - 690529 | 16310.8 |
| acetylornithine deacetylase | BJD13_RS04640 | Not Available | Positive | 690535 - 691635 | 38588.6 |
| acetylglutamate kinase | BJD13_RS04645 | Not Available | Positive | 691680 - 693023 | 49378.1 |
| gnat family n-acetyltransferase | BJD13_RS04650 | Not Available | Positive | 693029 - 693640 | 22297.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
