Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | strain LH3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
872906 bp
Thymine Count
873101 bp
Guanine Count
1612744 bp
Cytosine Count
1611142 bp
Genome Length
4969893 bp
Protein-coding Genes
4115 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriohemerythrin | BJD13_RS04095 | Not Available | Negative | 576363 - 576824 | 17835.2 |
| diguanylate cyclase | BJD13_RS04100 | Not Available | Negative | 576954 - 578252 | 48032.5 |
| nad(p)/fad-dependent oxidoreductase | BJD13_RS04105 | Not Available | Negative | 578337 - 579656 | 47942.5 |
| glutamine synthetase family protein | BJD13_RS04110 | Not Available | Negative | 579653 - 581032 | 49268.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | BJD13_RS04115 | Not Available | Positive | 581175 - 581930 | 26987.3 |
| glutamine synthetase family protein | BJD13_RS04120 | Not Available | Positive | 581937 - 583322 | 51493.3 |
| aspartate aminotransferase family protein | BJD13_RS04125 | Not Available | Positive | 583538 - 584905 | 49681.7 |
| polyamine abc transporter substrate-binding protein | BJD13_RS04130 | Not Available | Positive | 585125 - 586240 | 40435.3 |
| hlyd family secretion protein | BJD13_RS04135 | Not Available | Positive | 586490 - 587692 | 42967.7 |
| mdr family mfs transporter | BJD13_RS04140 | Not Available | Positive | 587689 - 589275 | 55502.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |
